Added to the atlas:

Now in the atlas:

Lovely list. My top pick from that one is the market stalls.

It should fix those issues.

It's caused by an extra node in there. Use :CC2DELNODE: to remove it. It can be a bit tricky to target properly, but if you zoom a bit out and place your pick cursor where I have indicated in the image, you should get it (I zoom out, because that makes the pick cursor larger compared to the entity, making it easier to get inside the aperture, it is a nice trick, because zooming out is often counterintuitive in these situations.) If you don't get it on the first try, just try a couple of times.